BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A08SP1|AL428148
(952 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1329 1832 0.0
3x_Contig1787 153 5e-37
3x_Contig1716 145 1e-34
3x_Contig1384 145 1e-34
3x_Contig1325 145 1e-34
3x_Contig1023 145 1e-34
3x_Contig695 145 1e-34
>3x_Contig1329
Length = 7405
Score = 1832 bits (921), Expect = 0.0
Identities = 947/955 (99%), Gaps = 3/955 (0%)
Strand = Plus / Minus
Query: 1 gatctttcgctgacttcagagatgaaaaggggccaatcattatttcctacctttatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2340 gatctttcgctgacttcagagatgaaaaggggccaatcattatttcctacctttatttca 2281
Query: 61 ttatcggtatctctttgccctttttgatcaatggttccattatcggtatcatctcgctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2280 ttatcggtatctctttgccctttttgatcaatggttccattatcggtatcatctcgctag 2221
Query: 121 gcgtaggtgattcattggcttccattattggtaaaaaatttggaagaaacagatggccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 gcgtaggtgattcattggcttccattattggtaaaaaatttggaagaaacagatggccaa 2161
Query: 181 atacttgtaaaactttcgagggcacttttgcattcattgcagctactggcataactacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 atacttgtaaaactttcgagggcacttttgcattcattgcagctactggcataactacag 2101
Query: 241 tgattatgaaagtttactttaactttttcaccgaggtgtcgttcatgaatttggttcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2100 tgattatgaaagtttactttaactttttcaccgaggtgtcgttcatgaatttggttcttg 2041
Query: 301 tatgtttcctagctggcatcttggaaggtaatagtactttgaatgataacttactaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 tatgtttcctagctggcatcttggaaggtaatagtactttgaatgataacttactaattc 1981
Query: 361 caactttcatgttgatattgttggaatctatgaaggaatagtattgatagatagtcaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1980 caactttcatgttgatattgttggaatctatgaaggaatagtattgatagatagtcaaac 1921
Query: 421 ctgttatgcaaaacctatatattcaaaatttgagtatgtagtaaatttatagattagggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1920 ctgttatgcaaaacctatatattcaaaatttgagtatgtagtaaatttatagattagggc 1861
Query: 481 ctatttttgttccaagggtacttcactgaccatgtttccatctttcttgcttctgaataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 ctatttttgttccaagggtacttcactgaccatgtttccatctttcttgcttctgaataa 1801
Query: 541 gatttgaatggtcaaaatgcgttataagttagtattgtgaaacgtaatgatataaataga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 gatttgaatggtcaaaatgcgttataagttagtattgtgaaacgtaatgatataaataga 1741
Query: 601 aaatcatgtttacacggag-kgtgatggttcactcaaaactcttgttaataagamattag 659
||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 1740 aaatcatgtttacacggagtggtgatggttcactcaaaactcttgttaataagaaattag 1681
Query: 660 ggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgactc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 ggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgactc 1621
Query: 720 cggactcgtccaatctttttatttcccctgttcattctggaccaatgatctctttttttg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 cggactcgtccaatctttttatttcccctgttcattctggaccaatgatctctttttttg 1561
Query: 780 atataacgatgtggtgcctattacacacaagctgagaatgttctgagaattcgtttacaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 atataacgatgtggtgcctattacacacaagctgagaatgttctgagaattcgtttacaa 1501
Query: 840 acatttcatatcatttacgttaaatatattaymcgtgtttactatttatttttgataatc 899
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1500 acatttcatatcatttacgttaaatatattatacgtgtttactatttatttttgataatc 1441
Query: 900 tttacttttcaatgtatagtttgaaat-maagaatgattcgagg-atatataaga 952
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1440 tttacttttcaatgtatagtttgaaatcaaagaatgattcgaggaatatataaga 1386
>3x_Contig1787
Length = 34189
Score = 153 bits (77), Expect = 5e-37
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 659 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6967 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 7026
Query: 719 ccggactcgtccaatctttttattt 743
|||||||||||||| |||||||||
Sbjct: 7027 ccggactcgtccaaaatttttattt 7051
>3x_Contig1716
Length = 19108
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 659 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 1202
Query: 719 ccggactcgtcca 731
|||||||||||||
Sbjct: 1201 ccggactcgtcca 1189
>3x_Contig1384
Length = 9372
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 659 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 324
Query: 719 ccggactcgtcca 731
|||||||||||||
Sbjct: 325 ccggactcgtcca 337
>3x_Contig1325
Length = 7053
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 659 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5966 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 6025
Query: 719 ccggactcgtcca 731
|||||||||||||
Sbjct: 6026 ccggactcgtcca 6038
>3x_Contig1023
Length = 4339
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 659 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2738 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 2679
Query: 719 ccggactcgtcca 731
|||||||||||||
Sbjct: 2678 ccggactcgtcca 2666
>3x_Contig695
Length = 2059
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 659 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 gggcgtgtggcgtagttggtagcgcgctcccttagcatgggagaggtcttcggttcgact 874
Query: 719 ccggactcgtcca 731
|||||||||||||
Sbjct: 873 ccggactcgtcca 861
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8279
Number of Sequences: 1807
Number of extensions: 8279
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 7
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)